Architecture

The lineage-first fabric and the engine underneath it

Two things carry the Mycelic name. The fabric is how independent memory holders exchange bounded, lineage-carrying artifacts and questions without a shared store.1 The engine, NeuralGraph, is the local memory graph each holder owns.2


Part 1 · The fabric

System model

Each agent owns a local memory graph. There are no raw cross-graph edges; exchange occurs only through typed artifacts validated at the boundary (ClaimEnvelope, RetrievalTrace, EvidenceExport), never through raw graph reads or a global merged store.13 A claim is supported by authorized derivations, and knowledge need not be stored as a literal sentence: independent holders can jointly reconstruct an answer no single one of them holds.4 An artifact carries owner, scope, temporal validity, lineage and authorization; a derivation records support, not a guarantee of truth.5 Reconstruction is demonstrated in the deterministic fixture and the Gate-1 tests, not in a deployment.6

Formally, agent i owns Gi = (Vi, Ei, ψi); a materialized artifact is a = (id, owner, z, Σ, τ, λ, p, refs): semantic state, scope, temporal validity, lineage, authorization and opaque evidence pointers; it is an optimisation and policy boundary.7

The formal definitions of the local graph and of a materialized artifact are held in the manuscript under review and will be added here after the review decision.

The QuestionArtifact

A question is a first-class, bounded, routable request rather than control flow: it carries an asker, a trigger, a scope, a budget, target units and a status, and it may travel when private memory cannot.8 Responses preserve contributors, evidence roots and unresolved disagreement; disclosure still requires authorization, because even a question can expose sensitive intent.9 In the organisational benchmark the artifact is implemented as a request for order-(k+1) cell counts answered by one-cell sketches.9

Formally, Q = (id, asker, q, trigger, Σ, τ, u, λctx, D, π, B, status): an uncertainty, a motivating lineage, candidate domains, a policy and a budget.10

The formal tuple definition of the QuestionArtifact is held in the manuscript under review and will be added here after the review decision.

Three axes

A horizontal plane coordinates peers; a vertical axis forms higher-level representations (in the benchmark, worker → team → department → region → executive; in the engine, MESSAGE → EPISODE → TOPIC → PERSONA); lineage threads preserve the evidence and transformations supporting each artifact and form a derivation DAG.11 Cross-functional projects remain overlapping scopes rather than forced branches of an organisation tree. Hierarchy is prior art; what is specific here is that the vertical axis never severs the lineage thread.12

Independent support versus copies

D3 Copies versus roots: ten copies of one root against three memories with three roots, before and after one root is removed Two panels. State 1, intact. Left: ten hollow teal memory dots, each joined by a thread to one solid teal origin dot, all inside one dashed failure-domain enclosure; independent support after the discount is 1. Right: three memories, each joined to its own origin inside its own dashed enclosure; independent support is 3. State 2, one root removed. Left: the single origin is struck out and all ten memories are greyed; independent support is 0, all ten are unsupported. Right: one of the three origins is struck out and its one memory is greyed; the other two memories keep their roots; independent support is 2, two of three remain. State 1 · intact ten copies, one root root independent support: 1 three memories, three roots independent support: 3 State 2 · one root removed ten copies, no root removed independent support: 0 all ten unsupported one of three roots removed independent support: 2 two of three remain
D3 Ten copies, one root. Left, ten memories descend from one origin inside one failure domain; right, three memories have three origins in three domains. In the second state one root is removed: on the left every copy loses its support at once, on the right two of three memories keep theirs. Hollow dots are memories, solid dots are evidence roots, dashed enclosures are failure domains; grey marks what the intervention removed. Sources: NeuralGraph/mycelic-org-benchmark/DESIGN.md §6 step 3; NeuralGraph/docs/BENCHMARKS.md ll.27-36; manuscript §3.1 (gated).

Support is counted by distinct independent evidence roots after a correlation discount, not by replica count: exact copies count 0; the same worker counts 0 beyond the first; same team 0.5; same department 0.8; otherwise 1.0.13 A verifier is not shown the current answer where that would contaminate independence; disagreement becomes a conflict object, never an automatic merge.14 Typed lineage retains the difference between a shared database and a shared human source; active lineage diversification chooses the acquisition action with the largest expected gain in survivability margin per cost.15 Two further design points, a lineage typing that keeps a shared database distinct from a shared human source and an active choice of which evidence to acquire next, are described in the manuscript under review.

The continual-discovery loop

  1. External question
  2. QuestionArtifact (bounded, policy, scope, budget)
  3. Policy-aware router
  4. Distributed evidence holders (bounded evidence only; no raw memory leaves)
  5. Lineage and provenance comparison
  6. Verification
  7. Contradiction, detected and localised into a conflict object
  8. Revision
  9. Epistemic state
  10. The next, internally generated question
D2 Continual-discovery loop, given as an ordered list at launch; step 10 feeds step 2. Steps 3 to 8 are as implemented in the organisational benchmark.16 The loop as a whole is described in the manuscript.17 Sources: NeuralGraph/mycelic-org-benchmark/DESIGN.md §6 ll.217-291; manuscript §4 ll.62-69 (gated).

The five epistemic functions are verification, contradiction, relation discovery, hypothesis generation and prediction/falsification; they are architectural functions, not all measured natural-language capabilities.they are roles the architecture defines, and not every one of them has been measured as a natural-language capability.18

Layer stack, with what exists today

D1 Layer stack: the four layers of the Mycelic memory fabric, with what exists today for each Left column: four horizontal layers, drawn from the bottom up. Bottom: Local evidence holders (agents = small local model + tools; local data and memory; raw memory never leaves; bounded evidence returns). Above it: Lineage-bound context (team or department; region or scope; cross-cutting scopes). Above that: Durable transport (bounded claims; evidence envelopes; causally ordered; audit-ready), drawn with a hatched fill and the tag “design” because the network transport exists only as design. Top: Lineage knowledge fabric (semantic index; scope graph; time intervals; lineage roots and failure domains). A gold arrow runs down the left side, labelled “questions travel as routable artifacts”; a teal arrow runs up the right side, labelled “evidence returns as bounded claims”. Right column, “what exists today”, one box beside each layer: beside Lineage knowledge fabric, the lineage analyser and repair planner in the coordinator, and LineageRecord and SupportRecord in the benchmark, tagged implemented / benchmark simulator; beside Durable transport, typed contracts validated at the boundary, no deployed network transport exists, tagged implemented (in-process) and, hatched, design (network); beside Lineage-bound context, scopes and failure domains as modelled in the coordinator fixture and the benchmark, tagged tested / benchmark simulator; beside Local evidence holders, the NeuralGraph engine with SQLite or in-memory storage and a local model endpoint, tagged implemented. Legend: solid = implemented, hatched = design. questions travel as routable artifacts evidence returns as bounded claims Lineage knowledge fabric semantic index scope graph time intervals lineage roots and failure domains Durable transport design bounded claims evidence envelopes causally ordered audit-ready Lineage-bound context team or department region or scope cross-cutting scopes Local evidence holders agents = small local model + tools local data and memory raw memory never leaves bounded evidence returns what exists today lineage analyser and repair planner in the coordinator; LineageRecord and SupportRecord in the benchmark implemented / benchmark simulator typed contracts validated at the boundary; no deployed network transport exists implemented (in-process) design (network) scopes and failure domains as modelled in the coordinator fixture and the benchmark tested / benchmark simulator NeuralGraph engine with SQLite or in-memory storage and a local model endpoint implemented solid = implemented hatched = design
D1 Layer stack with a second column, what exists today. Four layers drawn by us from repository descriptions, not reproduced from the manuscript. Questions travel down the left as routable artifacts; evidence returns up the right as bounded claims. Solid = implemented; hatched = design (network transport). Transport remains distinct from memory. Sources: NeuralGraph/state.md ll.19-30, 43-71; NeuralGraph/mycelic-org-benchmark/DESIGN.md §3.1, §4; manuscript Fig. 2 description (concept only, redrawn).
The four layers of the fabric, what each holds, what exists today for it and its status. Elements marked design are hatched in the diagram.
LayerWhat it holdsWhat exists todayStatus
Local evidence holders agents with a small local model and tools; local data and memory; raw memory never leaves; bounded evidence returns NeuralGraph engine with SQLite or in-memory storage and a local model endpoint19 implemented
Lineage-bound context team or department, region or scope, cross-cutting scopes scopes and failure domains as modelled in the coordinator fixture and the benchmark20 tested /
benchmark simulator
Durable transport bounded claims, evidence envelopes, causally ordered, audit-ready typed contracts validated at the boundary; no deployed network transport exists3 implemented (in-process) /
design (network)
Lineage knowledge fabric semantic index, scope graph, time intervals, lineage roots and failure domains lineage analyser and repair planner in the coordinator; LineageRecord and SupportRecord in the benchmark35 implemented /
benchmark simulator
Transport remains distinct from memory. Elements marked design are hatched in the diagram.

Part 2 · The engine: NeuralGraph

What it is

A graph-native memory and retrieval system for long-running AI agents.2 It turns conversations and events into structured, searchable memory; instead of a flat vector store it combines semantic retrieval, graph relationships, speaker identity, temporal reasoning, reranking and evidence attribution to recover the right context for an answer.21 Most agent-memory systems are good at finding text that looks similar to a query and weaker at questions that require identity, chronology, aggregation or multi-step reasoning (a positioning statement, not a measured comparison).22 Six question classes the engine targets: who said what; when did it happen; what changed over time; what facts belong together; why was this answer produced; what should happen when memory is insufficient.23

Graph-native memory

Memories are nodes with metadata and relationships rather than isolated text chunks, preserving identity, sequence, provenance and semantic connections.24 Nodes live in a MESSAGE → EPISODE → TOPIC → PERSONA hierarchy with a TEMPORAL anchor layer and are linked by six typed, weighted, signed edge types: TEMPORAL, SEMANTIC, ENTITY, CAUSAL, HIERARCHY and CO_ACTIVATION.25 Time and speaker identity are first-class metadata; relative expressions such as “yesterday” and “last week” are resolved against the original message timestamp.26

Retrieval

There is an index. Stage 1 is hybrid recall over vector similarity (a per-session LSH index with brute-force fallback for small sessions) and keyword search; later stages expand by entity edges, temporal chains, hierarchy traversal and co-activation; a final reranking stage scores candidates with several signals: semantic similarity, keyword match, entity overlap, temporal relevance, speaker-aware boosts, specificity bonuses and reranking deltas (signal names only; the design document’s weights are boost multipliers, not a normalised split, and are not shown).27 One reranking pass is an interference-style sweep over time × hierarchy, the mechanism the previous site called “wave-based resonance retrieval”; it is one signal in a hybrid pipeline, not the retrieval method, no isolated measurement attributes gains to it, and the measured gains on LoCoMo came from per-agent routing and dialogue-pair back-fill.28 Queries are routed into strict fact extraction, temporal, list, aggregation, memory-grounded inference or open-domain fallback modes.29

The retrieval Tesseract, and its patent figure

The router just described (query-type detection, per-store retrieval, weighted fusion) is the code artefact the company also describes in a patent filing, reproduced below as supplied.70 This is the retrieval Tesseract, not the coordination Tesseract of Part 1 (see “Two disambiguations” below); the two share a name for historical reasons only.68

Patent figure: Tesseract Router Architecture. FIG. 1 shows an input layer (user input, application/API, user device) feeding query ingress into a Tesseract Router with an inner memory cube, four ingress channels (temporal, semantic, relational, adversarial) and an outer routing layer producing a retrieval output, beside a block of specialized memory stores (episodic, semantic, temporal, external knowledge). FIG. 2 is a routing-process loop: analyze query, determine query type, compute routing weights, traverse Tesseract, retrieve and fuse results, with a feedback/learning path back to the start. FIG. 3 shows the same structure as five 2D projections (3D view, temporal plane, semantic plane, relational plane, adversarial plane). FIG. 4 stacks an application layer, an intelligence layer (routing, reasoning, confidence scoring), a memory layer and a storage layer.
Patent figure supplied by the company for the retrieval-side router (NeuralGraph/tesseract.py). This site did not independently verify a filing number or date; it is presented as a design record, not as evidence of running code.71 The table below maps each labelled part to what the source file actually contains, or marks it conceptual framing. Source: image supplied by the research team; mapping against NeuralGraph/NeuralGraph/tesseract.py, 2,208 lines.
Patent-figure element, and what it corresponds to in the 2,208-line source file, or why it is conceptual framing only.
Figure elementIn the sourceStatus
Specialized memory stores (episodic, semantic, temporal, external)four store classes exist, differently named and scoped: TemporalStore, EntityStore, ReasoningStore, AdversarialStore.72 Same four-way fan-out shape; the figure’s store names do not match the code’s.implemented (renamed)
Routing process (analyze → determine type → compute weights → traverse → retrieve and fuse, with feedback)detect_query_type() scores a QueryType (including ADVERSARIAL); per-store .retrieve() calls run; per-query weights (temporal_weight, entity_weight, multihop_weight, adversarial_weight, open_weight) are normalised to sum to 1 and fuse the four stores’ scored results.73implemented
Tesseract Router / Inner Memory Cube / Outer Routing Layer (cube geometry)no cube, hypercube or literal multi-dimensional data structure in the file; routing is four scored lists combined by scalar weights.conceptual framing (patent claim language)
Multi-dimensional view (3D / temporal / semantic / relational / adversarial planes)an illustration of the same four-plus-one signal set as separated planes; not a rendering of a runtime object.conceptual framing
System layer integration (application / intelligence / memory / storage)a generic four-layer split; corresponds loosely to the D1 layer stack in Part 1, drawn independently from repository descriptions.consistent, not verified line-for-line

Attribution: why was this answer produced

The engine records what happened at each retrieval stage, including candidate counts, latency, score components, reranking effects and the evidence supplied to the final answer, so every retrieval failure is measurable.30 This is the engine-level counterpart of lineage in the fabric.

Memory changes as it is used

Retrieval writes back: co-activation edges strengthen when nodes are retrieved together (capped at 3×) and timing-dependent plasticity adjusts temporal edges.31 A consolidation cycle decays activation, prunes weak edges, merges near-duplicates above a similarity threshold, creates hub summaries, promotes hot nodes up the hierarchy and evicts cold ones.32 Stated plainly so that operators know: retention is automatic unless configured, and there is no user-facing purge-on-demand feature today.33

Local models Configuration

The answering and embedding pipeline runs against a local model server: any OpenAI-compatible endpoint such as LM Studio, or Ollama, chosen from the configured base URL.34 The September 2026 campaign used gemma-4-e4b with nomic-embed-text v1.5.35 Model names are configuration, not product facts, and this site states no default model because the README and the code differ.36 Disclosure: the engine includes an optional open-domain fallback retriever for questions memory cannot answer; whether it is enabled is a configuration decision a deployment must make explicitly.37

Storage and isolation

Persistent SQLite or in-memory storage with indexes partitioned by session key and one LSH index per session.38 Session isolation is data scoping inside one storage layer; it is not encryption, tenancy or a security boundary, and this site does not present it as one. Multi-agent namespaces and permissions are a roadmap item.39

Status and roadmap

Under active development; current work focuses on single-hop extraction, temporal questions, list and aggregation queries, query routing, latency tracking and benchmark attribution.40

Planned, not done.39

  • planned publish reproducible benchmark results
  • planned a minimal quick-start
  • planned a documented API for the memory graph
  • planned graph visualisation tools
  • planned additional local and hosted model providers
  • planned multi-agent memory namespaces and permissions
  • planned a packaged library

Consequently there is no pip package, Docker image, SDK or REST API today. The source repository is public to read at github.com/anovruzov/NeuralGraph, but the licence has not been selected, so all rights are reserved until one is and nothing in it is offered for use or redistribution.4169

Intended use cases (not deployments): persistent memory for autonomous agents; personal assistants that remember conversations accurately; multi-agent shared memory; timeline and event reconstruction; long-horizon research assistants; benchmarkable retrieval-augmented generation; explainable memory retrieval.42

Evaluate the engine on your hardware

Implemented, demonstrated, proposed

What is implemented and tested, what is demonstrated only in a fixture, tests or simulation, what is proposed and unvalidated, and what is not claimed as novel.
StatusItemsSource
Implemented and tested
implemented tested
the NeuralGraph engine; coordination contracts, policy filter, rule-based synthesiser, lineage analyser, reversible failure injection, repair planner; the organisational benchmark’s structural mechanisms (sketch pooling, lineage, support discount, dedup, contradiction handling, revision, compression, routing, failure recovery, hypothesis test) 43
Demonstrated in a deterministic fixture, tests or symbolic simulation only
demonstrated
lineage-aware repair (7 of 9); Gate-1 reconstruction across two real SQLite holders; lineage-aware placement and continual questioning at population scale population-scale simulation results, under review 4445
Proposed and unvalidated (hatched everywhere)
proposed
the sparse question-priority formula; the stopping rule; federated public discovery in which regions keep raw records local and federate scoped abstractions; a deployed population of reasoning agents 46manuscript under review
Not claimed as novel graph memory; persistent memory; reconstruction; hierarchy 47stated in the lab’s own words

Every term, resolved

Rule: a word without a mechanism behind it is not used on this site. Spores, resonance and waves are out; the table says what each remaining word means in code or in the benchmark.48

Each word used on this site, the mechanism it names in code or in the benchmark, and where that mechanism is recorded.
Word on this siteMechanismSource
fabricthe coordinated set of independent memory holders plus typed artifacts and lineage threads; no global merged store1
threads / lineagelineage edges; LineageRecord.parent_claim_ids and derivation_operator; lineage_root_ids on every coordinated claim49
rootshashed root_worker_ids (benchmark) and lineage_root_ids (coordinator)50
the soil stays put / local-firstlocal evidence holders; raw memory never leaves; DLP: no text leaves a device51
rising / abstractionthe vertical axis: worker → team → department → region → executive; MESSAGE → EPISODE → TOPIC → PERSONA52
a question that travelsQuestionArtifact8
cutting a stranda failure domain; a lineage-root failure intervention53
regrowthlineage-aware repair: route to an independently rooted holder rather than adding replicas of the failed root54
bounded abstractiona scoped, byte-metered sketch or claim promoted upward instead of raw records55
independent supportsupport after the correlation discount (copies 0; same worker 0; same team 0.5; same department 0.8; else 1.0)13
conflict objecta first-class record of disagreement, resolved by independent-support ratio, freshness or region split, else kept unresolved14
capability survivalfraction of nine capabilities still answerable after an intervention56
per-agent (owner) routingroute a question naming one speaker to that speaker’s own store57
pair nodes / dialogue-pair back-fillembed each reply with the message before it; use as back-fill behind the routed search58
leakage-free harnessthe harness after removing the gold-answer acceptance gate and gold-category routing35
recall@kpresence of a gold-answer fragment in the top-k retrieved messages; a substring proxy59
judge sensitivityidentical answers score 13.5 to 64.9% depending only on the grader60
wavefront propagationan interference-style reranking pass over time × hierarchy; one signal, formerly marketed as wave-based resonance61
session isolationindex partitioning by session key inside one storage layer; not a security boundary62
minimum discovery layerthe lowest hierarchy layer at which some unit holds at least 1.25 × nmin matching evidence63
DLP / k-anonymity / canary tokenno text leaves a device; cells with n < k suppressed; planted tokens that measure leakage exactly64
false association ratefraction of accepted claims that are false in the noise-free population truth65
evidence classes A, B, C, D, Tmeasured retrieval; deterministic repair fixture; synthetic acquisition simulation; population-scale symbolic simulation; deterministic coordination tests66

Two disambiguations

  • Two ladders. manuscript-B0 to B7, B3Q, B6C (Class D) versus bench-B0 to B9 plus ORACLE. “B7” means lineage fabric plus questioning in the manuscript and lineage-aware hierarchy without questioning in the benchmark; the site always prefixes.67
  • Two Tesseracts. Tesseract (coordination) is the cross-node coordinator with typed contracts; Tesseract (retrieval) is an older single-node query-routing module with temporal, entity, reasoning and adversarial stores; they share a name for historical reasons only, and this site means the coordinator unless it says otherwise.68

Site vocabulary (chips and pills)

Evidence chips.

  • A measured retrieval
  • B deterministic fixture
  • C synthetic acquisition simulation
  • D population-scale symbolic simulation
  • T deterministic coordination tests
  • IP in progress, no results
  • W withdrawn

Status pills.

  • measured
  • simulated
  • implemented
  • tested
  • configuration
  • design
  • proposed (hatched)
  • in progress
  • superseded
  • planned

Sources

Paths are relative to the root of the NeuralGraph repository, which is public to read at github.com/anovruzov/NeuralGraph with no licence selected (all rights reserved); they are given as text, with line numbers checked against main on 2026-09-17, and files under mycelic-org-benchmark/ are on branch claude/mycelic-org-benchmark-9cnf35, not yet merged into main. “Manuscript” is the Mycelic research manuscript under review, cited by section and printed margin line number; entries marked gated are stripped from the deployed page until the authors clear publication. “website/” is the previous site, cited only for a withdrawn claim.

  1. NeuralGraph/state.md — Non-negotiable invariants, ll.19-30
  2. NeuralGraph/README.md — l.3
  3. NeuralGraph/state.md — contracts.py, ll.43-71
  4. NeuralGraph/state.md — Mission, ll.11-17; Gate 1, ll.171-200
  5. NeuralGraph/mycelic-org-benchmark/DESIGN.md — §4, ll.160-192
  6. NeuralGraph/state.md — Gate 1, ll.171-209
  7. Manuscript — §2, ll.34-43 (gated)
  8. NeuralGraph/mycelic-org-benchmark/DESIGN.md — §4 QuestionArtifact, ll.186-187
  9. NeuralGraph/mycelic-org-benchmark/DESIGN.md — §6 step 7, ll.269-276
  10. Manuscript — §2.1, ll.44-49 (gated)
  11. NeuralGraph/mycelic-org-benchmark/DESIGN.md — §3.1, ll.80-86; §4 LineageRecord, ll.183-190; NeuralGraph/NeuralGraph_System_Architecture.md — §3.4.1
  12. Manuscript — §3, ll.50-54; §6.2, ll.244-257 (gated)
  13. NeuralGraph/mycelic-org-benchmark/DESIGN.md — §6 step 3, ll.238-242
  14. NeuralGraph/mycelic-org-benchmark/DESIGN.md — §6 step 5, ll.249-255
  15. Manuscript — §3.1, ll.55-61; §4, ll.67-68 (gated)
  16. NeuralGraph/mycelic-org-benchmark/DESIGN.md — §6, ll.217-291 (steps 3 to 8 as implemented in the benchmark)
  17. Manuscript — §4, ll.62-69 (gated)
  18. Manuscript — §4, ll.62-66
  19. NeuralGraph/NeuralGraph_System_Architecture.md — §3.2; NeuralGraph/NeuralGraph/llm_backend.py — ll.1-14
  20. NeuralGraph/state.md — Gate 1, ll.171-200; NeuralGraph/mycelic-org-benchmark/DESIGN.md — §3.1, ll.80-86
  21. NeuralGraph/README.md — l.5
  22. NeuralGraph/README.md — l.9
  23. NeuralGraph/README.md — ll.11-18
  24. NeuralGraph/README.md — ll.22-23
  25. NeuralGraph/NeuralGraph_System_Architecture.md — §3.1.3
  26. NeuralGraph/README.md — ll.36-37, 118-125
  27. NeuralGraph/NeuralGraph_System_Architecture.md — §3.2.1, §3.3.1; NeuralGraph/README.md — ll.25-34
  28. NeuralGraph/NeuralGraph_System_Architecture.md — §5.2; NeuralGraph/NeuralGraph/wavefront.py — ll.1-33; NeuralGraph/docs/BENCHMARKS.md — ll.88-99
  29. NeuralGraph/README.md — ll.39-47
  30. NeuralGraph/README.md — ll.49-50, 125
  31. NeuralGraph/NeuralGraph_System_Architecture.md — §2.3, §4.2; NeuralGraph/NeuralGraph/temporal.py — l.61
  32. NeuralGraph/NeuralGraph_System_Architecture.md — §3.4.3; NeuralGraph/NeuralGraph/consolidation.py — ll.66-82
  33. website/index.html — l.148 (withdrawn claim)
  34. NeuralGraph/NeuralGraph/llm_backend.py — ll.1-14, 22-24
  35. NeuralGraph/docs/BENCHMARKS.md — Track B header, ll.70-72
  36. NeuralGraph/README.md — ll.90-98; NeuralGraph/NeuralGraph/llm_backend.py — ll.22-24
  37. NeuralGraph/README.md — ll.39-47; NeuralGraph/NeuralGraph/external_retriever.py — l.249
  38. NeuralGraph/NeuralGraph_System_Architecture.md — §3.2.1, §4.3
  39. NeuralGraph/README.md — Roadmap, ll.131-139
  40. NeuralGraph/README.md — Current Status, ll.127-129
  41. NeuralGraph/README.md — License, ll.145-147
  42. NeuralGraph/README.md — Example Use Cases, ll.108-116
  43. NeuralGraph/state.md — ll.43-71; NeuralGraph/mycelic-org-benchmark/README.md — ll.44-49
  44. NeuralGraph/docs/BENCHMARKS.md — ll.16-62; NeuralGraph/state.md — ll.171-209
  45. Manuscript — §5.3-5.6 (gated)
  46. Manuscript — §4.1, ll.70-74; §6.3, ll.258-264; §6.1, ll.231-232 (gated)
  47. Manuscript — §6.2, ll.244-257 (gated)
  48. NeuralGraph/docs/BENCHMARKS.md — ll.88-99 (measured gains are not wave-based)
  49. NeuralGraph/mycelic-org-benchmark/DESIGN.md — §4, ll.183-190; NeuralGraph/state.md — ll.171-200
  50. NeuralGraph/mycelic-org-benchmark/DESIGN.md — §4, ll.183-190; NeuralGraph/state.md — ll.195-197
  51. NeuralGraph/state.md — ll.19-30; NeuralGraph/mycelic-org-benchmark/DESIGN.md — §3.6, ll.145-153
  52. NeuralGraph/mycelic-org-benchmark/DESIGN.md — §3.1, ll.80-86; NeuralGraph/NeuralGraph_System_Architecture.md — §3.4.1
  53. NeuralGraph/docs/BENCHMARKS.md — ll.27-36
  54. NeuralGraph/docs/BENCHMARKS.md — ll.16-62; NeuralGraph/state.md — ll.72-84
  55. NeuralGraph/mycelic-org-benchmark/README.md — ll.3-6
  56. NeuralGraph/docs/BENCHMARKS.md — ll.16-62
  57. NeuralGraph/docs/research/REPORT.md — §2, l.30
  58. NeuralGraph/docs/research/REPORT.md — §2, l.31
  59. NeuralGraph/docs/BENCHMARKS.md — ll.70-99
  60. NeuralGraph/docs/BENCHMARKS.md — ll.121-131
  61. NeuralGraph/NeuralGraph_System_Architecture.md — §5.2; NeuralGraph/NeuralGraph/wavefront.py — ll.1-33
  62. NeuralGraph/NeuralGraph_System_Architecture.md — §4.3
  63. NeuralGraph/mycelic-org-benchmark/DESIGN.md — §3.5, ll.128-143
  64. NeuralGraph/mycelic-org-benchmark/DESIGN.md — §3.6, ll.145-153; §5, ll.199-202
  65. NeuralGraph/mycelic-org-benchmark/docs/REPORT.md — ll.130-135
  66. Manuscript — §5.1, ll.76-80; NeuralGraph/state.md — ll.145-154
  67. Manuscript — Table 2, p.5; NeuralGraph/mycelic-org-benchmark/README.md — ll.139-153
  68. NeuralGraph/state.md — Current Architecture, ll.32-44; NeuralGraph/NeuralGraph/tesseract.py — ll.1-36
  69. Repository check, 2026-09-17: GET api.github.com/repos/anovruzov/NeuralGraph returned private: false, visibility: public, default branch main, license: null; git merge-base --is-ancestor on a fresh fetch puts commit e054178 on main and commit 13a1729 and branch claude/mycelic-org-benchmark-9cnf35 off it
  70. Image supplied by the research team, titled “Tesseract Router Architecture”, FIG. 1–4; no filing number, jurisdiction or date is printed on the supplied figure and none is asserted here
  71. This site’s own reading of the supplied figure against NeuralGraph/NeuralGraph/tesseract.py, ll.1-2208, 2026-09-17; not a legal or patent-office verification
  72. NeuralGraph/NeuralGraph/tesseract.py — store classes TemporalStore l.525, EntityStore l.1305, ReasoningStore l.1512, AdversarialStore l.1683, under the section comment “SPECIALIZED MEMORY STORES” l.509
  73. NeuralGraph/NeuralGraph/tesseract.pyQueryType l.304 and detect_query_type() l.313; class Tesseract l.1942 constructing the four stores ll.1956-1959; per-store retrieval calls ll.2007-2035; weight normalisation and fusion ll.2126-2167

Source ledger for this page: NeuralGraph/state.md; NeuralGraph/README.md; NeuralGraph/NeuralGraph_System_Architecture.md; NeuralGraph/NeuralGraph/llm_backend.py, wavefront.py, external_retriever.py, consolidation.py, temporal.py, tesseract.py; NeuralGraph/docs/BENCHMARKS.md; NeuralGraph/docs/research/REPORT.md; NeuralGraph/mycelic-org-benchmark/README.md, DESIGN.md, docs/REPORT.md; website/index.html (withdrawn); manuscript (gated).